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Homing in on endogenous badnaviral elements: Development of multiplex PCR-DGGE for detection and rapid identification of badnavirus sequences in yam germplasm, Silva, G., Bömer, M., Turaki, A. A.*, Nkere, C., Kumar, P. L. and Seal, S., in: Frontiers in Plant Science, volume 13, number -: 846989, pages 1-16, ISSN 1664-462X, 2022. [DOI] |
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Plant pest surveillance: from satellites to molecules, Silva, G., Tomlinson, J., Onkokesung, N., Sommer, S., Mrisho, L., Legg, J., Adams, I. P., Gutierrez-Vazquez, Y., Howard, T. P., Laverick, A., Hossain, O., Wei, Q., Gold, K. M. and Boonham, N., in: Emerging Topics in Life Sciences, volume 5, number 2, pages 275-287, ISSN 2397-8554, 2021. [DOI] |
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Assessment of yam mild mosaic virus coat protein gene sequence diversity reveals the prevalence of cosmopolitan and African group of isolates in Ghana and Nigeria, Nkere, C., Otoo, E.*, Atiri, G.*, Onyeka, J.*, Silva, G., Bomer, M., Seal, S. and Kumar, P. L., in: Current Plant Biology, number 100156, pages 1-6, ISSN 2214-6628, 2020. [DOI] |
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Molecular characterization of a new virus species identified in yam (Dioscorea spp.) by high-throughput sequencing, Silva, G., Bomer, M., Rathnayake, A. I., Sewe, S. O., Visendi, P., Oyekanmi, J., Quain, M. D.*, Akomeah, B.*, Kumar, P. L. and Seal, S., in: Plants, volume 8, number 6: 167, pages 1-10, ISSN 2223-7747, 2019. [DOI] |
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Tissue culture and next-generation sequencing: a combined approach for detecting yam (Dioscorea spp.) viruses, Bomer, M., Rathnayake, A. I., Visendi, P., Sewe, S. O., Sicat, J. P. A., Silva, G., Kumar, P. L. and Seal, S., in: Physiological and Molecular Plant Pathology, pages 1-13, ISSN 0885-5765, 2018. [DOI] |
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Rolling circle amplification to screen yam germplasm for badnavirus infections and to amplify and characterise novel badnavirus genomes, Bomer, M., Turaki, A. A.*, Rathnayake, A. I., Silva, G., Kumar, P. L. and Seal, S., in: Bio-Protocol, volume 8, number 1, pages 1-16, ISSN 2331-8325, 2018. [DOI] |
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Chromogenic detection of yam mosaic virus by closed-tube reverse transcription loop-mediated isothermal amplification (CT-RT-LAMP), Nkere, C., Oyekanmi, J., Silva, G., Bomer, M., Atiri, G.*, Onyeka, J.*, Maroya, N., Seal, S. and Kumar, P. L., in: Archives of Virology, pages 1-10, ISSN 0304-8608, 2018. [DOI] |
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Rapid detection of potyviruses from crude plant extracts, Silva, G., Oyekanmi, J., Nkere, C., Bomer, M., Kumar, P. L. and Seal, S., in: Analytical Biochemistry, volume 546, pages 17-22, ISSN 0003-2697, 2018. [DOI] |
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PCR-DGGE analysis: unravelling complex mixtures of badnavirus sequences present in yam germplasm, Turaki, A., Bomer, M., Silva, G., Kumar, P. L. and Seal, S., in: Viruses, volume 9, number 7, pages 1-24, ISSN 1999-4915, 2017. [DOI] |
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A sequence-independent strategy for amplification and characterisation of episomal badnavirus sequences reveals three previously uncharacterised yam badnaviruses, Bomer, M., Turaki, A., Silva, G., Kumar, P. L. and Seal, S., in: Viruses, volume 8, number 7, pages 1-22, ISSN 1999-4915, 2016. [DOI] |
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Rapid and specific detection of Yam mosaic virus by reverse-transcription recombinase polymerase amplification, Silva, G., Bomer, M., Nkere, C., Kumar, P. L. and Seal, S., in: Journal of Virological Methods, volume 222, pages 138-144, ISSN 0166-0934, 2015. [DOI] |
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Developing diagnostics to detect badnavirus and endogenous pararetrovirus DNA sequences in West African yam breeding lines, Turaki, A., Kumar, P. L., Lopez-Montes, A., Bomer, M., Silva, G. and Seal, S., Abstracts, P. 65 in Program and Book of Abstracts of the First Global Conference on Yam 'to harness research innovations to unleash the potential of yam', 3-6 October, Accra Ghana., 2013. |
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